蛋白只二级结构中H,E,L分别代表什么?
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蛋白只二级结构中H,E,L分别代表什么?
PROFsec summary overall your protein can be classified as:
all-alpha given the following classes:
'all-alpha':%H > 45% AND %E < 5%
'all-beta':%H < 5% AND %E > 45%
'alpha-beta':%H > 30% AND %E > 20%
'mixed':all others
Predicted secondary structure composition for your protein:sec str type H E L
% in protein 61.90 0.79 37.30
此段话怎么理解?
PROFsec summary overall your protein can be classified as:
all-alpha given the following classes:
'all-alpha':%H > 45% AND %E < 5%
'all-beta':%H < 5% AND %E > 45%
'alpha-beta':%H > 30% AND %E > 20%
'mixed':all others
Predicted secondary structure composition for your protein:sec str type H E L
% in protein 61.90 0.79 37.30
此段话怎么理解?
![蛋白只二级结构中H,E,L分别代表什么?](/uploads/image/z/7727313-57-3.jpg?t=%E8%9B%8B%E7%99%BD%E5%8F%AA%E4%BA%8C%E7%BA%A7%E7%BB%93%E6%9E%84%E4%B8%ADH%2CE%2CL%E5%88%86%E5%88%AB%E4%BB%A3%E8%A1%A8%E4%BB%80%E4%B9%88%3F)
H = alpha-helix
E = beta-sheet
L = loop (coil)
Predicted secondary structure composition for your protein:sec str type H E L
% in protein 61.90 0.79 37.30
就是secondary structure prediction的结果里
你的protein里predict有61.9%是helix,0.79%是sheet,37.3是loop/coil
----------------
'all-alpha':%H > 45% AND %E < 5%
'all-beta':%H < 5% AND %E > 45%
'alpha-beta':%H > 30% AND %E > 20%
'mixed':all others
这个是protein的分类,估计是CATH或者SCOP这样的分类
E = beta-sheet
L = loop (coil)
Predicted secondary structure composition for your protein:sec str type H E L
% in protein 61.90 0.79 37.30
就是secondary structure prediction的结果里
你的protein里predict有61.9%是helix,0.79%是sheet,37.3是loop/coil
----------------
'all-alpha':%H > 45% AND %E < 5%
'all-beta':%H < 5% AND %E > 45%
'alpha-beta':%H > 30% AND %E > 20%
'mixed':all others
这个是protein的分类,估计是CATH或者SCOP这样的分类